Update a SpatialFeatureExperiment to the latest version of object structure. This is usually called by internal functions.
Usage
# S4 method for SpatialFeatureExperiment
updateObject(object, ..., verbose = FALSE)
SFEVersion(object)Arguments
- object
An old SpatialFeatureExperiment object.
- ...
Additional arguments that are ignored.
- verbose
Logical scalar indicating whether a message should be emitted as the object is updated.
Details
Version 1.1.4 adds package version to the SFE object. We are considering an
overhaul of the spatialGraphs slot in a future version using the
sfdep package to decouple the adjacency graph from the edge weights.
See also
objectVersion, which is used to determine if the
object is up-to-date.
Examples
library(SFEData)
sfe <- McKellarMuscleData("small")
#> see ?SFEData and browseVignettes('SFEData') for documentation
#> loading from cache
# First version of SFE object doesn't log SFE package version, so should be NULL
SFEVersion(sfe)
#> [1] ‘1.6.1’
sfe <- updateObject(sfe)
# See current version
SFEVersion(sfe)
#> [1] ‘1.6.1’