R: bootstrap summary

get_bootstrap_summary

R Documentation

bootstrap summary

Extract the bootstrap summary from a sleuth object that has been initialized in sleuth_prep.

get_bootstrap_summary(obj, target_id, units = "est_counts")

`obj`	a `sleuth` object such that `extra_bootstrap_summary = TRUE` inside of `sleuth_prep`.
`target_id`	a character vector of length 1 indicating the target_id (transcript or gene name depending on aggregation mode)
`units`	a character vector of either 'est_counts' or 'tpm' (also requires `extra_bootstrap_summary = TRUE` in `sleuth_prep`)

a data.frame with the summary statistics across all samples for that particular target