Download

To install sleuth start R and first install rhdf5 by typing:

source("http://bioconductor.org/biocLite.R")
biocLite("rhdf5")

Then install devtools by typing

install.packages("devtools")

and install sleuth by typing

devtools::install_github("pachterlab/sleuth")

If you have conda, a cross-platform package manager installed, you can install sleuth via the bioconda channel.

conda install --channel bioconda r-sleuth

Next load sleuth with

library("sleuth")

The sleuth GitHub repository containing the sleuth source code is here.