src/lengthdistribution.h

#ifndef LengthDistribution_H
#define LengthDistribution_H

#include <vector>
#include <string>

class LengthDistribution {
  std::vector<double> _kernel;
  std::vector<double> _hist;
  double _tot_mass;
  double _sum;
  size_t _min;
  size_t _bin_size;
  
public:
  LengthDistribution(double alpha, size_t max_val, size_t prior_mu,
                     size_t prior_sigma, size_t kernel_n, double kernel_p,
                     size_t bin_size = 1);
  LengthDistribution(std::string param_file_name, std::string length_type);
  size_t max_val() const;
  size_t min_val() const;
  double mean() const;
  void add_val(size_t len, double mass);
  double pmf(size_t len) const;
  double cmf(size_t len) const;
  std::vector<double> cmf() const;
  double tot_mass() const;
  std::string to_string() const;
  void append_output(std::ofstream& outfile, std::string length_type) const;
};

#endif