This is the complete list of members for
MarkovModel, including all inherited members.
| calc_marginals() | MarkovModel | |
| fast_learn(const Sequence &seq, double mass, const std::vector< double > &fl_cmf) | MarkovModel | |
| get_indices(const Sequence &seq, int left, std::vector< char > &indices) | MarkovModel | |
| get_indices(const Sequence &seq) | MarkovModel | |
| marginal_prob(size_t w, size_t nuc) const | MarkovModel | |
| MarkovModel(size_t order, size_t window_size, size_t num_pos, double alpha) | MarkovModel | |
| seq_prob(const Sequence &seq, int left) const | MarkovModel | |
| transition_prob(size_t p, size_t cond, size_t curr) const | MarkovModel | |
| update(const Sequence &seq, int left, double mass) | MarkovModel | |
| update(size_t p, size_t i, size_t j, double mass) | MarkovModel | |
1.7.3 
