Authors Title Journal Date Transcriptome
Author Title Journal Date Transcriptome
Bottomly, Daniel,
Walter, Nicole A. R.,
Hunter, Jessica Ezzell,
Darakjian, Priscila,
Kawane, Sunita,
Buck, Kari J.,
Searles, Robert P.,
Mooney, Michael,
McWeeney, Shannon K.,
Hitzemann, Robert
Evaluating Gene Expression in C57BL/6J and DBA/2J Mouse Striatum Using RNA-Seq and Microarrays PLoS ONE 2011-3-24 online Mus musculus
Ayers, Katie L.,
Lambeth, Luke S.,
Davidson, Nadia M.,
Sinclair, Andrew H.,
Oshlack, Alicia,
Smith, Craig A.
Identification of candidate gonadal sex differentiation genes in the chicken embryo using RNA-seq BMC Genomics 2015-12 print Gallus gallus
Eswaran, Jeyanthy,
Cyanam, Dinesh,
Mudvari, Prakriti,
Reddy, Sirigiri Divijendra Natha,
Pakala, Suresh B.,
Nair, Sujit S.,
Florea, Liliana,
Fuqua, Suzanne A. W.,
Godbole, Sucheta,
Kumar, Rakesh
Transcriptomic landscape of breast cancers through mRNA sequencing Scientific Reports 2012-2-14 online Homo sapiens
Corominas, Jordi,
Ramayo-Caldas, Yuliaxis,
Puig-Oliveras, Anna,
Estellé, Jordi,
Castelló, Anna,
Alves, Estefania,
Pena, Ramona N,
Ballester, Maria,
Folch, Josep M
Analysis of porcine adipose tissue transcriptome reveals differences in de novo fatty acid synthesis in pigs with divergent muscle fatty acid composition BMC Genomics 2013 print Sus scrofa
Waldeck, Kelly,
Cullinane, Carleen,
Ardley, Kerry,
Shortt, Jake,
Martin, Ben,
Tothill, Richard W.,
Li, Jason,
Johnstone, Ricky W.,
McArthur, Grant A.,
Hicks, Rodney J.,
et al.
Long term, continuous exposure to panobinostat induces terminal differentiation and long term survival in the TH-MYCN neuroblastoma mouse model International Journal of Cancer 2016-7-1 print Mus musculus
Risso, Davide,
Schwartz, Katja,
Sherlock, Gavin,
Dudoit, Sandrine
GC-Content Normalization for RNA-Seq Data BMC Bioinformatics 2011 print Saccharomyces cerevisiae
Robinson, David G.,
Wang, Jean Y.,
Storey, John D.
A nested parallel experiment demonstrates differences in intensity-dependence between RNA-seq and microarrays Nucleic Acids Research 2015-6-30 online Saccharomyces cerevisiae
Ng, Shi-Yan,
Soh, Boon Seng,
Rodriguez-Muela, Natalia,
Hendrickson, David G.,
Price, Feodor,
Rinn, John L.,
Rubin, Lee L.
Genome-wide RNA-Seq of Human Motor Neurons Implicates Selective ER Stress Activation in Spinal Muscular Atrophy Cell Stem Cell 2015-11 print Homo sapiens
Nikaido, M.,
Noguchi, H.,
Nishihara, H.,
Toyoda, A.,
Suzuki, Y.,
Kajitani, R.,
Suzuki, H.,
Okuno, M.,
Aibara, M.,
Ngatunga, B. P.,
et al.
Coelacanth genomes reveal signatures for evolutionary transition from water to land Genome Research 2013-10-1 print Latimeria chalumnae
Trapnell, Cole,
Hendrickson, David G,
Sauvageau, Martin,
Goff, Loyal,
Rinn, John L,
Pachter, Lior
Differential analysis of gene regulation at transcript resolution with RNA-seq Nature Biotechnology 2012-12-9 online Homo sapiens
Ren, Shancheng,
Peng, Zhiyu,
Mao, Jian-Hua,
Yu, Yongwei,
Yin, Changjun,
Gao, Xin,
Cui, Zilian,
Zhang, Jibin,
Yi, Kang,
Xu, Weidong,
et al.
RNA-seq analysis of prostate cancer in the Chinese population identifies recurrent gene fusions, cancer-associated long noncoding RNAs and aberrant alternative splicings Cell Research 2012-5 print Homo sapiens
Ferreira, Todd,
Wilson, Sarah R.,
Choi, Yoon Gi,
Risso, Davide,
Dudoit, Sandrine,
Speed, Terence P.,
Ngai, John
Silencing of Odorant Receptor Genes by G Protein βγ Signaling Ensures the Expression of One Odorant Receptor per Olfactory Sensory Neuron Neuron 2014-2 print Danio rerio
Ayers, Katie L,
Davidson, Nadia M,
Demiyah, Diana,
Roeszler, Kelly N,
Grützner, Frank,
Sinclair, Andrew H,
Oshlack, Alicia,
Smith, Craig A
RNA sequencing reveals sexually dimorphic gene expression before gonadal differentiation in chicken and allows comprehensive annotation of the W-chromosome Genome Biology 2013 print Gallus gallus
Boj, Sylvia F.,
Hwang, Chang-Il,
Baker, Lindsey A.,
Chio, Iok In Christine,
Engle, Dannielle D.,
Corbo, Vincenzo,
Jager, Myrthe,
Ponz-Sarvise, Mariano,
Tiriac, Hervé,
Spector, Mona S.,
et al.
Organoid Models of Human and Mouse Ductal Pancreatic Cancer Cell 2015-1 print Mus musculus
Ellahi, A.,
Thurtle, D. M.,
Rine, J.
The Chromatin and Transcriptional Landscape of Native Saccharomyces cerevisiae Telomeres and Subtelomeric Domains Genetics 2015-6-1 print Saccharomyces cerevisiae
Yi, Guoqiang,
Yuan, Jingwei,
Bi, Huijuan,
Yan, Wei,
Yang, Ning,
Qu, Lujiang
In-Depth Duodenal Transcriptome Survey in Chickens with Divergent Feed Efficiency Using RNA-Seq PLOS ONE 2015-9-29 online Gallus gallus